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Raja SO, Sivaraman G, Biswas S, Singh G, Kalim F, Kandaswamy P, Gulyani A.  2021.  A Tunable Palette of Molecular Rotors Allows Multicolor, Ratiometric Fluorescence Imaging and Direct Mapping of Mitochondrial Heterogeneity.. ACS Appl Bio Mater. 4(5):4361-4372. DOI:10.1021/acsabm.1c00135.
Ramesh S, Daniel D, Götherström C, Madhuri V.  2021.  Trophic effects of multiple administration of mesenchymal stem cells in children with osteogenesis imperfecta.. Clin Transl Med. 11(4):e385. DOI:10.1002/ctm2.385.
Gupta R, Laxman S.  2019.  tRNA wobble-uridine modifications as amino acid sensors and regulators of cellular metabolic state.. Curr Genet. DOI:10.1007/s00294-019-01045-y.
Gupta R, Walvekar A, Liang S, Rashida Z, Shah P, Laxman S.  2019.  A tRNA modification balances carbon and nitrogen metabolism by regulating phosphate homeostasis.. Elife. 8 DOI:10.7554/eLife.44795.
Corsi GI, Gadekar VP, Haukedal H, Doncheva NT, Anthon C, Ambardar S, Palakodeti D, Hyttel P, Freude K, Seemann SE, Gorodkin J.  2023.  The transcriptomic landscape of neurons carrying PSEN1 mutations reveals changes in extracellular matrix components and non-coding gene expression.. Neurobiol Dis. 178:105980. DOI:10.1016/j.nbd.2022.105980.
Corsi GI, Gadekar VP, Haukedal H, Doncheva NT, Anthon C, Ambardar S, Palakodeti D, Hyttel P, Freude K, Seemann SE, Gorodkin J.  2023.  The transcriptomic landscape of neurons carrying PSEN1 mutations reveals changes in extracellular matrix components and non-coding gene expression.. Neurobiol Dis. 178:105980. DOI:10.1016/j.nbd.2022.105980.
Gala HP, Saha D, Venugopal N, Aloysius A, Purohit G, Dhawan J.  2022.  A transcriptionally repressed quiescence program is associated with paused RNA polymerase II and is poised for cell cycle re-entry.. J Cell Sci. 135(15) DOI:10.1242/jcs.259789.
Joshi N, Yan J, Levy S, Bhagchandani S, Slaughter KV, Sherman NE, Amirault J, Wang Y, Riegel L, He X, Rui TShi, Valic M, Vemula PK, Miranda OR, Levy O, Gravallese EM, Aliprantis AO, Ermann J, Karp JM.  2018.  Towards an arthritis flare-responsive drug delivery system.. Nat Commun. 9(1):1275. DOI:10.1038/s41467-018-03691-1.
Dubey S, Jaiswal B, Gupta A.  2022.  TIP60 acts as a regulator of genes involved in filopodia formation and cell migration during wound healing.. J Biol Chem. 298(7):102015. DOI:10.1016/j.jbc.2022.102015.
Cattenoz PB, Sakr R, Pavlidaki A, Delaporte C, Riba A, Molina N, Hariharan N, Mukherjee T, Giangrande A.  2020.  Temporal specificity and heterogeneity of the fly immune cells’ transcriptional landscape. The EMBO Journal (in press).
Cattenoz PB, Sakr R, Pavlidaki A, Delaporte C, Riba A, Molina N, Hariharan N, Mukherjee T, Giangrande A.  2020.  Temporal specificity and heterogeneity of Drosophila immune cells.. EMBO J. :e104486. DOI:10.15252/embj.2020104486.
Periasamy J, Kurdekar V, Jasti S, Nijaguna MB, Boggaram S, Hurakadli MA, Raina D, Kurup LMeenakshi, Chintha C, Manjunath K, Goyal A, Sadasivam G, Bharatham K, Padigaru M, Potluri V, Venkitaraman AR.  2018.  Targeting Phosphopeptide Recognition by the Human BRCA1 Tandem BRCT Domain to Interrupt BRCA1-Dependent Signaling.. Cell Chem Biol. 25(6):677-690.e12. DOI:10.1016/j.chembiol.2018.02.012.
Kumar V, Lakshman PKumar Chun, Prasad TKootteri, Manjunath K, Bairy S, Vasu AS, Ganavi B, Jasti S, Kamariah N.  2024.  Target-based drug discovery: Applications of fluorescence techniques in high throughput and fragment-based screening.. Heliyon. 10(1):e23864. DOI:10.1016/j.heliyon.2023.e23864.
Emery A, Hardwick BS, Crooks AT, Milech N, Watt PM, Mithra C, Kumar V, Giridharan S, Sadasivam G, Mathivanan S, Sudhakar S, Bairy S, Bharatham K, Hurakadli MA, Prasad TK, Kamariah N, Muellner M, Coelho M, Torrance CJ, McKenzie GJ et al..  2021.  Target identification for small-molecule discovery in the FOXO3a tumor-suppressor pathway using a biodiverse peptide library.. Cell Chem Biol. DOI:10.1016/j.chembiol.2021.05.009.
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Wahlgren WY, Dunevall E, North RA, Paz, iv A, Scalise M, Bisignano P, Bengtsson-Palme J, Goyal P, Claesson E, Caing-Carlsson R, Andersson R, Beis K, Nilsson UJ, Farewell A, Pochini L, Indiveri C, Grabe M, Dobson RCJ, Abramson J, Ramaswamy S et al..  2018.  Substrate-bound outward-open structure of a Na-coupled sialic acid symporter reveals a new Na site.. Nat Commun. 9(1):1753. DOI:10.1038/s41467-018-04045-7.
Wahlgren WY, Dunevall E, North RA, Paz, iv A, Scalise M, Bisignano P, Bengtsson-Palme J, Goyal P, Claesson E, Caing-Carlsson R, Andersson R, Beis K, Nilsson UJ, Farewell A, Pochini L, Indiveri C, Grabe M, Dobson RCJ, Abramson J, Ramaswamy S et al..  2018.  Substrate-bound outward-open structure of a Na-coupled sialic acid symporter reveals a new Na site.. Nat Commun. 9(1):1753. DOI:10.1038/s41467-018-04045-7.
Kurdekar V, Giridharan S, Subbarao J, Nijaguna MB, Periasamy J, Boggaram S, Shivange AV, Sadasivam G, Padigaru M, Potluri V, Venkitaraman AR, Bharatham K.  2019.  Structure-Guided Synthesis and Evaluation of Small-Molecule Inhibitors Targeting Protein-Protein Interactions of BRCA1 tBRCT Domain.. ChemMedChem. 14(18):1620-1632. DOI:10.1002/cmdc.201900300.
Banerjee S, Coussens NP, Gallat F-X, Sathyanarayanan N, Srikanth J, Yagi KJ, Gray JSS, Tobe SS, Stay B, Chavas LMG, Ramaswamy S.  2016.  Structure of a heterogeneous, glycosylated, lipid-bound, ıt in vivo-grown protein crystal at atomic resolution from the viviparous cockroach ıt Diploptera punctata. IUCrJ. 3:282–293. DOI:10.1107/S2052252516008903.
Banerjee S, Coussens NP, Gallat F-X, Sathyanarayanan N, Srikanth J, Yagi KJ, Gray JSS, Tobe SS, Stay B, Chavas LMG, Ramaswamy S.  2016.  Structure of a heterogeneous, glycosylated, lipid-bound, ıt in vivo-grown protein crystal at atomic resolution from the viviparous cockroach ıt Diploptera punctata. IUCrJ. 3:282–293. DOI:10.1107/S2052252516008903.
Mathivanan S, Lakshman PKumar Chun, Singh M, Giridharan S, Sathish K, Hurakadli MA, Bharatham K, Kamariah N.  2022.  Structure of a 14-3-3ε:FOXO3a Phosphopeptide Complex Reveals 14-3-3 Isoform-Specific Binding of Forkhead Box Class O Transcription Factor (FOXO) Phosphoproteins.. ACS Omega. 7(28):24344-24352. DOI:10.1021/acsomega.2c01700.
Ganesan S, Palani HKumar, Lakshmanan V, Balasundaram N, Alex AAbu, David S, Venkatraman A, Korula A, George B, Balasubramanian P, Palakodeti D, Vyas N, Mathews V.  2019.  Stromal cells downregulate miR-23a-5p to activate protective autophagy in acute myeloid leukemia.. Cell Death Dis. 10(10):736. DOI:10.1038/s41419-019-1964-8.
Ganesan S, Palani HKumar, Lakshmanan V, Balasundaram N, Alex AAbu, David S, Venkatraman A, Korula A, George B, Balasubramanian P, Palakodeti D, Vyas N, Mathews V.  2019.  Stromal cells downregulate miR-23a-5p to activate protective autophagy in acute myeloid leukemia.. Cell Death Dis. 10(10):736. DOI:10.1038/s41419-019-1964-8.
Prabhakara C, Godbole R, Sil P, Jahnavi S, Gulzar S-E-J, van Zanten TS, Sheth D, Subhash N, Chandra A, Shivaraj A, Panikulam P, U I, Nuthakki VKumar, Puthiyapurayil TParassini, Ahmed R, Najar AHussain, Lingamallu SManoz, Das S, Mahajan B, Vemula P et al..  2021.  Strategies to target SARS-CoV-2 entry and infection using dual mechanisms of inhibition by acidification inhibitors.. PLoS Pathog. 17(7):e1009706. DOI:10.1371/journal.ppat.1009706.
Prabhakara C, Godbole R, Sil P, Jahnavi S, Gulzar S-E-J, van Zanten TS, Sheth D, Subhash N, Chandra A, Shivaraj A, Panikulam P, U I, Nuthakki VKumar, Puthiyapurayil TParassini, Ahmed R, Najar AHussain, Lingamallu SManoz, Das S, Mahajan B, Vemula P et al..  2021.  Strategies to target SARS-CoV-2 entry and infection using dual mechanisms of inhibition by acidification inhibitors.. PLoS Pathog. 17(7):e1009706. DOI:10.1371/journal.ppat.1009706.

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