Publications 2014
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Aung, A., Sea, T., Lu, S., Wang, Y., Jamora, C.*, del Alamo, J.C.* and Varghese, S.* (2014) 3-D Traction stresses activate protease-dependent invasion of cancer cells. Biophys. J (in press). * co-corresponding authors
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Brahme, N.N., Harburger, D.S., Kemp-O'Brien, K, Stewart, R., Raghavan, S., Parsons, M., Calderwood, D.A. (2013). Kindlin binds migfi.lin tandem LIM domains and regulates migfi.lin focal adhesion localization and recruitment dynamics.J Biol Chern. Dec 6;288(49}35604-16. Epub 2013 Oct 28.
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Calliari, A., Farias, J., Puppo, A., Canclini, L., Mercer, J.A, Munroe, D., Sotelo, J.R, & Sotelo Silveira, J.R (2014) Myosin Va associates with mRNA in ribonucleoprotein particles present in myelinated peripheral axons and in the central nervous system. Dev Neurobiol 74:382-96.
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Chaudhary, O.P., Paz, A, Adelman, J.L., Colletier, J.P., Abramson, J. and Grabe (2014) M. Structure-guided simulations illuminate the mechanism of ATP transport through VDACL Nat Struct Mol Biol.;21(7):626-32. doi: 0.1038/nsmb.2841.
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Gallat, F.X., Matsugaki, N., Coussens, N.P., Yagi, K.J., Boucles, M., Higashi, T., Tsuji, D., Tatano, Y., Suzuki, M. and Mizohata, E. (2014) In vivo crystallography at X-ray free-electron lasers:the next generation of structural biology?, Philosophical Transactions of the Royal Society B:Biological Sciences, 369,1647,20130497.
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Gangi, S.T., Cho, C., Govindappa, S., Apicella, M.A., Ramaswamy, S. (2014) Bacterial periplasmic sialic acid-binding proteins exhibit a conserved binding site, Biological Crystallography, 70,7.
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Gajanayake, T., #Olariu, R, #Leclere, F.M., Dhayani, A., Yang, Z., Bongoni, A.K., Banz, Y., Constantinescu, M.A., Karp, J.M., * Vemula, P.K, * Rieben, R. and* Vogelin, E. (2014) A single localized dose of enzyme-responsive hydrogel improves long-term survival of a vascularized composite allograft.Sci. Trans!. Med., 6, 249ra110. (#Denotes equal contribution, *Corresponding authors)
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Gupte, T.M., Haque, F., Gangadharan, B., Sunitha, M.S., Rani, D.S., Mukundan, N., Jambekar, A., Thangaraj, K., Sowdhamini, R, Sommese, RF., Nag, S., Spudich, J.A., Mercer, J.A. (2014) Mechanistic Heterogeneity in Contractile Properties of TPM1Mutants Associated with Inherited Cardiomyopathies. J Biol Chern, under review.
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Huet-Calderwood, C., Brahme, N.N., Kumar, N., Stiegler, AL., Raghavan, S., Boggan, T.J, Calderwood, D.A (2014) Differential binding to the ILK complex determines kindlin isoform adhesion localization and integrin activation. J Cell Sci. Aug 1. pii:jcs.155879. [Epub ahead of print] PMID: 25086068.
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Liu, L., Yoshioka, M., Nakajima, M., Ogasawara, A., Liu, J., Hasegawa, K., Li, S., Zou, J., Nakatsuji, N., Kamei, K and Chen, Y. (2014) Nanofibrous gelatin substrates for long-term expansion of human pluripotent stem cells. Biomaterials, 35(24) 6259-6267.
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Lee, D.J., Chen, S.W., Du, F., Nakasaki, M., Shih, V.F.S., Hoffmann, A. and Jamora, C. (2014) Regulation and function of the caspase-1inflammasome in a wound-like microenvironment. J. Investigative Dermatology. (in press)
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Otsuji, T.G., Bin, J., Yoshimura, A., Tamura, M., Tateyama, D., Minami, I., Yoshikawa, Y., Aiba, K, Heuser, J.E., Nishino, T., Hasegawa, K, and Nakatsuji, N. (2014) A Novel 3-D Sphere Culture System Containing Functional Polymers for Large-scale Human Pluripotent Stem Cell Production.Stem Cell Report, 2(5) 734-745.
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Purushotham, A., Campbell, B.C.V., Straka, M., Mlynash, M., Olivot, J-M., Bammer, R, Kemp, S.M.,Albers, G.W., Lansberg, M.G. (2013) Apparent diffusion coefficient threshold for delineation of ischemic core, International Journal of Stroke (Jun 27.doi:10.1111/ijs.12068. Epub ahead of print).
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Singh, D., Kumari, A., Ramaswamy, S. and Ramanathan, G. (2014) Expression, purification and substrate specificities of 3-nitrotoluene dioxygenase from Diaphorobacter sp. strain DS2, Biochemical and Biophysical Research Communications, 445,1,36-42.
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Sadasivam, S. and DeCaprio, J. A. (2013) The DREAM complex: Master coordinator of cell cycle dependent gene expression. Nature Reviews Cancer 13,585-595. (Inspired the cover page art: "Sweet Dreams" of the same issue)
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Sambasivan, R* and Tajbakhsh, S. (2014). Adult skeletal muscle stem cells. In Vertebrate Myogenesis.; Editor Beate Brand-Saberi, Springer. pp.191-213. doi: 10.1007/978-3-662-44608-9_9. * Corresponding author
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Sarkar, S.D., Yoshida, N. and Hasegawa, K (2014) Overview of pancreatic replacement of 13-cells from various cell sources. Stem Cell Therapy for Organ Failures, Editor S.Indumathi, Springer press, (in press).
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Schredelseker, J., Paz, A., Lopez, C.J., Altenbach, C., Leung, C.S., Drexler, M.K, Chen, J.N., Hubbell, W.L., Abramson, J. (2014) High resolution structure and double electron-electron resonance of the zebrafish voltage-dependent anion channel2 reveal an oligomeric population. J Biol Chern. 2;289(18):12566-77- doi:10.1074/jbc.M113.497438.
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Sotelo, J.R., Canclini, L., Kun, A., Sotelo-Silveira, J.R., Calliari, A., Cal, K., Bresque, M., Dipaolo, A., Farias, J., Mercer, J.A. (2014) Glia to axon RNA transfer. Dev Neurobiol74:292-302.
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Srivastava, S., Sowpati, D.T., Garapati, H.S., Puri, D.R, Dhawan, J., Mishra, RK. (2014) A ChiP-on chip tiling array approach detects functional histone-free regions associated with boundaries at vertebrate HOX genes. Genomics Data 2 78-81.
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Udagawa, T., Farny, N.G., Jakovcevski, M., Kaphzan, H., Alarcon, J.M., Anilkumar, S., Ivshina, M., Hurt, J.A., Nagaoka, K.A., Nalavadi, V.C., Lorenz, L.J., Bassell, G.J., Akbarian, S., Chattarji, S., Klann, E., and Richter, J.D. (2013) Genetic and Acute CPEB Depletion Ameliorate Fragile X Pathophysiology. Nature Medicine 19, 1473-1477
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Vishavkarma, R, Raghavan, S., Kuyyamudi,C., Majumder, A., Dhawan, J. and Pullarkat, P.A (2014) Role of actin filaments in correlating nuclear shape and cell spreading. PLOS One (in press).
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Ver, H., Aaron, M., Gakhar, L., Piper, RC. and Ramaswamy, S. (2014) Crystal Structure of a Complex of NODI CARD and Ubiquitin, PloS one,9,8,ei040I7.
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Wijetunge, L.S., Chattarji, S., Wyllie, D.A.J., & Kind, P.C. (2013) Fragile X syndrome: from targets to treatment. Neuropharmacology 68:83-96.
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Yasuda,S. and Hasegawa,K. (2014) Development of growth factor-free human pluripotent stem cell culture system. In Cell Biology and Materials Science, Editor Jong,Y and Nakatsuji, N, University of Taiwan System Press, pp. 79-88