Department of Biotechnology
inStem (Institute for Stem Cell Science and Regenerative Medicine)

The E3 ubiquitin ligase Pib1 regulates effective gluconeogenic shutdown upon glucose availability.

Publication Type

Research Support, Non-U.S. Gov't

Date of Publication

November 15, 2019

Journal

The Journal of biological chemistry

Volume/Issue

294/46

ISSN

1083-351X

Cells use multiple mechanisms to regulate their metabolic states in response to changes in their nutrient environment. One example is the response of cells to glucose. In growing in glucose-depleted medium, the re-availability of glucose leads to the down-regulation of gluconeogenesis and the activation of glycolysis, leading to “glucose repression.” However, our knowledge of the mechanisms mediating the glucose-dependent down-regulation of the gluconeogenic transcription factors is limited. Using the major gluconeogenic transcription factor Rds2 as a candidate, we identify here a novel role for the E3 ubiquitin ligase Pib1 in regulating the stability and degradation of Rds2. Glucose addition to cells growing under glucose limitation results in a rapid ubiquitination of Rds2, followed by its proteasomal degradation. Through and experiments, we establish Pib1 as the ubiquitin E3 ligase that regulates Rds2 ubiquitination and stability. Notably, this Pib1-mediated Rds2 ubiquitination, followed by proteasomal degradation, is specific to the presence of glucose. This Pib1-mediated ubiquitination of Rds2 depends on the phosphorylation state of Rds2, suggesting a cross-talk between ubiquitination and phosphorylation to achieve a metabolic state change. Using stable isotope-based metabolic flux experiments, we find that the loss of Pib1 results in an imbalanced gluconeogenic state, regardless of glucose availability. Pib1 is required for complete glucose repression and enables cells to optimally grow in competitive environments when glucose again becomes available. Our results reveal the existence of a Pib1-mediated regulatory program that mediates glucose repression when glucose availability is restored.

Alternate Journal

J Biol Chem

PubMed ID

31604822

PubMed Central ID

PMC6873170

Authors

Vineeth Vengayil
Zeenat Rashida
Sunil Laxman

Keywords

Ubiquitination
Saccharomyces cerevisiae
Saccharomyces cerevisiae Proteins
Phosphorylation
Gluconeogenesis
Proteasome Endopeptidase Complex
Proteolysis
Ubiquitin
Ubiquitin-Protein Ligase Complexes
Transcription Factors
Ubiquitin-Protein Ligases
Glucose