Department of Biotechnology
inStem (Institute for Stem Cell Science and Regenerative Medicine)

Mutation burden profile in familial Alzheimer’s disease cases from India.

Publication Type

Research Support, Non-U.S. Gov't

Date of Publication

April 1, 2018

Journal

Neurobiology of aging

Volume/Issue

64

ISSN

1558-1497

This study attempts to identify coding risk variants in genes previously implicated in Alzheimer’s disease (AD) pathways, through whole-exome sequencing of subjects (N = 17) with AD, with a positive family history of dementia (familial AD). We attempted to evaluate the mutation burden in genes encoding amyloid precursor protein metabolism and previously linked to risk of dementias. Novel variants were identified in genes involved in amyloid precursor protein metabolism such as PSEN1 (chr 14:73653575, W161C, tgg > tgT), PLAT (chr 8:42039530,G272R), and SORL1 (chr11:121414373,G601D). The mutation burden assessment of dementia-related genes for all 17 cases revealed 45 variants, which were either shared across subjects, or were present in just the 1 patient. The study shows that the clinical characteristics, and genetic correlates, obtained in this sample are broadly comparable to the other studies that have investigated familial forms of AD. Our study identifies rare deleterious genetic variations, in the coding region of genes involved in amyloid signaling, and other dementia-associated pathways.

Alternate Journal

Neurobiol Aging

PubMed ID

29329714

Authors

Adhikarla Syama
Somdatta Sen
Lakshmi Narayanan Kota
Biju Viswanath
Meera Purushottam
Mathew Varghese
Sanjeev Jain
Mitradas M Panicker
Odity Mukherjee

Keywords

Mutation
Exome Sequencing
Genetic Association Studies
Middle Aged
LDL-Receptor Related Proteins
India
Risk
Presenilin-1
Tissue Plasminogen Activator
Alzheimer Disease
Amyloid beta-Protein Precursor
Membrane Transport Proteins
Signal Transduction
Aged
Genetic Predisposition to Disease
Humans
Genetic Variation