Department of Biotechnology
inStem (Institute for Stem Cell Science and Regenerative Medicine)

C-State: an interactive web app for simultaneous multi-gene visualization and comparative epigenetic pattern search.

Publication Type

Journal Article

Date of Publication

September 13, 2017

Journal

BMC bioinformatics

Volume/Issue

18/Suppl 10

ISSN

1471-2105

Comparative epigenomic analysis across multiple genes presents a bottleneck for bench biologists working with NGS data. Despite the development of standardized peak analysis algorithms, the identification of novel epigenetic patterns and their visualization across gene subsets remains a challenge.

Alternate Journal

BMC Bioinformatics

PubMed ID

28929968

PubMed Central ID

PMC5606219

Authors

Divya Tej Sowpati
Surabhi Srivastava
Jyotsna Dhawan
Rakesh K Mishra

Keywords

Genomics
Transcription, Genetic
Epigenomics
Genes
HeLa Cells
Internet
Humans
K562 Cells
Promoter Regions, Genetic
Web Browser
Embryonic Stem Cells
Algorithms
Software